Small RNA Library Prep Kit for Illumina
All the reagents and components required to generate small RNA libraries to be used for next-generation sequencing on an Illumina platform
For research use only and NOT intended for in vitro diagnostics.
Small RNA Library Prep Kit for Illumina
All the reagents and components required to generate small RNA libraries to be used for next-generation sequencing on an Illumina platform
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Overview
- Optimized for low input RNA, especially from bodily fluids such as plasma or serum at 1ng of RNA
- Simple and quick workflow: library could be prepared in less than 5 hours
- No gel purification for selected types of samples
- Protocol optimized for RNA isolated from different types of input, including liquid biopsies (blood, plasma, serum and urine)
- Complements Norgen's Best-in-Class Total RNA (including microRNA) Purification Technology
The Small RNA Library Prep Kit for Illumina consists of all the reagents and components required to generate small RNA libraries to be used for next-generation sequencing on an Illumina platform. All molecular reagents including adaptors, primers, enzyme mixes and buffers are provided. A purification module is also provided for rapid purification of nucleic acid products generated at various steps of the workflow. The purification module utilizes Norgen’s patent resin technology which enhances recovery of desired library intermediates or final products. The library prep workflow could be used for different forms of input including purified total RNA or enriched small RNA, as well as RNA from low content inputs such as plasma, serum and urine.
Workflow
Details
Supporting Data
Kit Specifications
|
|
Number of preps |
24
|
Number of indices provided | 12 (for 24 preps, indexes 1-24 or 25-48) |
Time required to complete 6 libraries | As little as 5 hours |
Input RNA required | As little as 50 pg |
Storage Conditions and Product Stability
Some components require storage at -20°C, 4°C or room temperature. See individual components and box labels for storage conditions.
Step | Component | Cat. 64600 (24 preps) |
---|---|---|
3' AdaptorLigation to Template RNA | 3' Adaptor | 30 µL |
3' Adaptor Ligation Master Mix | 320 µL | |
T4 RNA Ligase 2 (Truncated) | 35 µL | |
5' Adaptor Ligation | 5' Adaptor | 30 µL |
5' Adaptor Ligation Master Mix | 320 µL | |
T4 RNA Ligase 1 | 35 µL | |
cDNA Synthesis from Ligated RNA Product | Reverse Primer | 30 µL |
cDNA Synthesis Master Mix | 220 µL | |
TruScript ReverseTranscriptase | 35 µL | |
PCR Amplification | 2x NGS PCR Master Mix | 1.32 µL |
PCR Reverse Primer | 81 µL | |
Forward Index Primer | Included in Small RNA Library Prep Forward Index Primers (# 64640 or # 64610) | |
Size Selection | NGS MW Ladder | 50 µL |
NGS Control Ladder | 50 µL | |
Loading Dye | 300 µL | |
Nuclease-Free Water | 1.25 µL |
Component | Cat. 63500 (75 preps) |
---|---|
Buffer RL | 40 mL |
Wash Solution A | 38 mL (Reconstituted to 128 mL) |
Elution Solution A | 6 mL |
Columns | 75 |
Gel Filtration Columns | 24 |
Collection Tubes | 75 |
Elution Tubes | 75 |
Product Insert | 1 |
Documentation
Citations
Title | Metabolite signatures associated with microRNA miR-143-3p serve as drivers of poor lung function trajectories in childhood asthma |
Journal | EBioMedicine. 2024. |
Authors | Kevin M. Mendez, Sofina Begum, Anshul Tiwari, Rinku Sharma, Qingwen Chen, Rachel S. Kelly, et al. |
Title | Circulating miRNAs associate with historical childhood asthma hospitalization in different serum vitamin D groups |
Journal | Respiratory Res. 2024. |
Authors | Hong, X., Jiang, M., Kho, A.T. et al. |
Title | Systems Genomics Reveals microRNA Regulation of ICS Response in Childhood Asthma |
Journal | Cells. 2023. |
Authors | Sharma R, Tiwari A, Kho AT, Celedón JC, Weiss ST, Tantisira KG, McGeachie MJ |
Title | Intrauterine Smoke Exposure, microRNA Expression during Human Lung Development, and Childhood Asthma |
Journal | Int J Mol Sci. 2023. |
Authors | Rosenberg L, Liu C, Sharma R, Wood C, Vyhlidal CA, Gaedigk R, Kho AT, Ziniti JP, Celedón JC, Tantisira KG, et al. |
Title | Obesity and PCOS radically alters the snRNA composition of follicular fluid extracellular vesicles |
Journal | Frontiers in Endocrinology. 2023. |
Authors | Wyse BA, Salehi R, Russell SJ, Sangaralingam M, Jahangiri S, Tsang BK and Librach CL |
Title | Benchmarking omics-based prediction of asthma development in children |
Journal | Respiratory Res. 2023. |
Authors | Wang, XW., Wang, T., Schaub, D.P. et al. |
Title | Characterization of Extracellular Vesicle-Coupled miRNA Profiles in Seminal Plasma of Boars with Divergent Semen Quality Status |
Journal | Int J Mol Sci. 2023. |
Authors | Dlamini NH, Nguyen T, Gad A, Tesfaye D, Liao SF, Willard ST, Ryan PL, Feugang JM. |
Title | Coordinated Regulation of Myonuclear DNA Methylation, mRNA, and miRNA Levels Associates With the Metabolic Response to Rapid Synergist Ablation-Induced Skeletal Muscle Hypertrophy in Female Mice |
Journal | Function (Oxford, England). 2023. |
Authors | Ismaeel A, Thomas NT, McCashland M, Vechetti IJ, Edman S, Lanner JT, Figueiredo VC, Fry CS, McCarthy JJ, Wen Y, Murach KA, von Walden F. |
Title | Circulating MicroRNAs associated with Bronchodilator Response in Childhood Asthma |
Journal | Research Square (preprint). 2023. |
Authors | Sharma, et al. |
Title | Systems Genomics Reveals microRNA Regulation of ICS Response in Childhood Asthma |
Journal | Cells. 2023. |
Authors | Sharma, R., Tiwari, A., Kho, A. T., Celedón, J. C., Weiss, S. T., Tantisira, K. G., & McGeachie, M. J. |
Title | Expression of Extracellular Vesicle PIWI-Interacting RNAs Throughout hiPSC-Cardiomyocyte Differentiation |
Journal | Frontiers in Physiology. 2022. |
Authors | Louro Ana F., Virgolini Nikolaus, Paiva Marta A., Isidro Inês A., Alves Paula M., Gomes-Alves Patrícia, Serra Margarida. |
Title | Bioactivity and miRNome Profiling of Native Extracellular Vesicles in Human Induced Pluripotent Stem Cell-Cardiomyocyte Differentiation |
Journal | Advanced science (Weinheim, Baden-Württemberg, Germany). 2022. |
Authors | Louro AF, Paiva MA, Oliveira MR, Kasper KA, Alves PM, Gomes-Alves P, Serra M. |
Title | Hydrogel-Embedded Poly(Lactic-co-Glycolic Acid) Microspheres for the Delivery of hMSC-Derived Exosomes to Promote Bioactive Annulus Fibrosus Repair |
Journal | SAGE Journals. 2022. |
Authors | Tyler J., Keti Vaso, and James C. Iatridis, et al. |
Title | Bioactivity and miRNome Profiling of Native Extracellular Vesicles in Human Induced Pluripotent Stem Cell-Cardiomyocyte Differentiation |
Journal | Advanced Science. 2022. |
Authors | Ana F. Louro,Marta A. Paiva,Marta R. Oliveira,Katharina A. Kasper,Paula M. Alves,Patrícia Gomes-Alves,Margarida Serra |
Title | Expression of Extracellular Vesicle PIWI-Interacting RNAs Throughout hiPSC-Cardiomyocyte Differentiation |
Journal | Front Physiol 2022. |
Authors | Ana F. Louro, Nikolaus Virgolini, Marta A. Paiva, Inês A. Isidro, Paula M. Alves, Patrícia Gomes-Alves, and Margarida Serra |
Title | Alteration of miRNAs in Small Neuron‑Derived Extracellular Vesicles of Alzheimer's Disease Patients and the Effect of Extracellular Vesicles on Microglial Immune Responses |
Journal | Journal of Molecular Neuroscience . 2022. |
Authors | Devrim Yagmur Durur, Bora Tastan, Kemal Ugur Tufekci, Melis Olcum, Hamdiye Uzuner, Gökhan Karakülah, Gorsev Yener, Sermin Genc |
Title | Extracellular vesicle characteristics and microRNA content in cerebral palsy and typically developed individuals at rest and in response to aerobic exercise |
Journal | Frontiers in Physiology. 2022. |
Authors | Vechetti IJ, Norrbom J, Alkner B, Hjalmarsson E, Palmcrantz A, Pontén E, Pingel J, von Walden F and Fernandez-Gonzalo R. |
Title | Urine miRNAs as potential biomarkers for systemic reactions induced by exposure to embedded metal |
Journal | Biomarkers in Medicine. 2021. |
Authors | Ivan J Vechetti , Yuan Wen, Jessica F Hoffman, Alexander P Alimov, Vernieda B Vergara, John F Kalinich, Joanna M Gaitens, Stella E Hines, Melissa A McDiarmid, John J McCarthy & Charlotte A Peterson |
Title | High Throughput Sequencing of MicroRNA in Rainbow Trout Plasma, Mucus, and Surrounding Water Following Acute Stress |
Journal | Frontiers in Physiology. 2021. |
Authors | Heather Ikert, Michael D. J. Lynch, Andrew C. Doxey, John P. Giesy, Mark R. Servos, Barbara A. Katzenback, Paul M. Craige |
Title | Distinct Exosomal miRNA Profiles from BALF and Lung Tissue of COPD and IPF Patients |
Journal | International Journal of Molecular Sciences. 2021. |
Authors | Gagandeep Kaur, Krishna Prahlad Maremanda, Michael Campos, Hitendra S. Chand, Feng Li, Nikhil Hirani, M. A. Haseeb, Dongmei Li, Irfan Rahman |
Title | Distinct Exosomal miRNA Profiles from BALF and Lung Tissue of COPD and IPF Patients |
Journal | Int J Mol Sci. 2021. |
Authors | Kaur G, Maremanda KP, Campos M, Chand HS, Li F, Hirani N, Haseeb MA, Li D, Rahman I. |
Title | Circulating MicroRNA: Incident Asthma Prediction and Vitamin D Effect Modification |
Journal | J Pres. Med. 2021. |
Authors | Li J, Tiwari A, Mirzakhani H, Wang AL, Kho AT, McGeachie MJ, Litonjua AA, Weiss ST, Tantisira KG |
Title | Seasonal Variation in miR-328-3p and let-7d-3p Are Associated With Seasonal Allergies and Asthma Symptoms in Children |
Journal | Allergy Asthma Immunol Res.. 2021. |
Authors | Tiwari A, Wang AL, Li J, Lutz SM, Kho AT, Weiss ST, Tantisira KG, McGeachie MJ |
Title | High Throughput Sequencing of MicroRNA in Rainbow Trout Plasma, Mucus, and Surrounding Water Following Acute Stress |
Journal | Frontiers in Physiology. 2021. |
Authors | Ikert H, Lynch MDJ, Doxey AC, Giesy JP, Servos MR, Katzenback BA and Craig PM |
Title | COPD-associated miR-145-5p is downregulated in early-decline FEV1 trajectories in childhood asthma |
Journal | J Allergy Clin Immunol. 2021. |
Authors | Anshul Tiwari, Jiang Li, Alvin T. Kho, Scott T. Weiss, Kelan G. Tantisira, Michael J. McGeachie, et al. |
Title | Circulating MicroRNAs and Treatment Response in Childhood Asthma |
Journal | Am J Respir Crit Care Med. 2020. |
Authors | Jiang Li, Ronald Panganiban, Alvin T. Kho, Michael J. McGeachie, Leanna Farnam, Robert P. Chase, Scott T. Weiss, Quan Lu, and Kelan G. Tantisira |
Title | Exosomal microRNAs are novel circulating biomarkers in cigarette, waterpipe smokers, E-cigarette users and dual smokers |
Journal | BMC Medical genomics. 2020. |
Authors | Singh, K.P., Maremanda, K.P., Li, D. et al. |
Title | Distinctive Cellular Transcriptomic Signature and MicroRNA Cargo of Extracellular Vesicles of Horse Adipose and Endometrial Mesenchymal Stem Cells from the Same Donors |
Journal | Cell Reprogramming. 2020. |
Authors | Felipe Navarrete, Yat Sen Wong, Joel Cabezas, Gonzalo Riadi, José Manríquez, Daniela Rojas, Ana Carolina Furlanetto Mançanares, Lleretny Rodriguez-Alvarez, Fernando Saravia, and Fidel Ovidio Castro. |
Title | MicroRNAs from Extracellular Vesicles Secreted by Bovine Embryos as Early Biomarkers of Developmental Competence |
Journal | Int J Mol Sci. 2020. |
Authors | Melo-Baez B, Wong YS, Aguilera CJ, Cabezas J, Mançanares ACF, Riadi G, Castro FO, Rodriguez-Alvarez L. |
Title | Circulating MicroRNAs and Treatment Response in Childhood Asthma |
Journal | ATS Jounals. 2020. |
Authors | Jiang Li , Ronald Panganiban , Alvin T. Kho , Michael J McGeachie , Leanna Farnam , Robert P. Chase , Scott T Weiss , Quan Lu , and Kelan G Tantisira |
Title | Exosomal microRNAs are novel circulating biomarkers in cigarette, waterpipe smokers, E-cigarette users and dual smokers |
Journal | BMC Medical Genomics. 2020. |
Authors | Kameshwar P. Singh, Krishna P. Maremanda, Dongmei Li & Irfan Rahman |
Title | Serum microRNAs in ASD: Association With Monocyte Cytokine Profiles and Mitochondrial Respiration |
Journal | Frontiers in Psychiatry. 2019. |
Authors | Jyonouchi H, Geng L, Toruner GA., Rose S, Bennuri SC. and Frye RE |
Title | Small RNA-sequence analysis of plasma-derived extracellular vesicle miRNAs in smokers and patients with chronic obstructive pulmonary disease as circulating biomarkers |
Journal | J Extracellular Vesicles. 2019. |
Authors | Isaac Kirubakaran Sundar, Dongmei Li, Irfan Rahman |
Title | Extracellular vesicles from endometriosis patients are characterized by a unique miRNA-lncRNA signature |
Journal | JCI Insight. 2019. |
Authors | Kasra Khalaj, Jessica E. Miller, Harshavardhan Lingegowda, Asgerally T. Fazleabas, Steven L. Young, Bruce A. Lessey, Madhuri Koti, and Chandrakant Tayade |
Title | Comprehensive Profiling of the Circulatory miRNAome Response to a High Protein Diet in Elderly Men: A Potential Role in Inflammatory Response Modulation. |
Journal | Mol Nutr Food Res. 2019 Apr;63(8):e1800811. |
Authors | Ramzan F, Mitchell CJ, Milan AM, Schierding W, Zeng N, Sharma P, Mitchell SM, D'Souza RF, Knowles SO, Roy NC, Sjödin A, Wagner KH, Cameron-Smith D. |
Title | Extracellular vesicles from endometriosis patients are characterized by a unique miRNA-lncRNA signature |
Journal | JCI Insight. 2019. |
Authors | Kasra Khalaj, Jessica E Miller, Harshavardhan Lingegowda, Asgerally T Fazleabas, Steven L Young, Bruce A Lessey, Madhuri Koti, Chandrakant Tayade |
Title | Small RNA-sequence analysis of plasma-derived extracellular vesicle miRNAs in smokers and patients with chronic obstructive pulmonary disease as circulating biomarkers |
Journal | Journal of Extracellular Vesicles, 8(1). 2019. |
Authors | Sundar, I. K., Li, D., & Rahman, I. |
Title | Diversity and signature of small RNA in different bodily fluids using next generation sequencing |
Journal | BMC genomics, 19(1), 408. 2018. |
Authors | El-Mogy, M., Lam, B., Haj-Ahmad, T. A., McGowan, S., Yu, D., Nosal, L., ... & Haj-Ahmad, Y. |
Title | Diversity and signature of small RNA in different bodily fluids using next generation sequencing |
Journal | BMC Genetics. 2018. |
Authors | El-Mogy, M., Lam, B., Haj-Ahmad, T.A. et al. |